Ghosh, Tapash Chandra : rechercher sur Z-Library

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1

Overlapping genes: A significant genomic correlate of prokaryotic growth rates

Saha, Deeya, Podder, Soumita, Panda, Arup, Ghosh, Tapash Chandra

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 274 KB

english, 2016

2

Chaperone client proteins evolve slower than non-client proteins

Victor, Manish Prakash, Acharya, Debarun, Chakraborty, Sandip, Ghosh, Tapash Chandra

Journal:

Functional & Integrative Genomics

Année:

2020

Fichier:

PDF, 554 KB

2020

3

Studies on the conformation of and metal ion binding by teichoic acid of Staphylococcus aureus

Medini Kanta Pal, Tapash Chandra Ghosh, Jimut Kanti Ghosh

Journal:

Année:

1990

Langue:

english

Fichier:

PDF, 306 KB

english, 1990

4

Binding of dyes by teichoic acid in competition with other polyanions

Medini Kanta Pal, Tapash Chandra Ghosh

Journal:

Macromolecular Chemistry and Physics

Année:

1991

Langue:

english

Fichier:

PDF, 254 KB

english, 1991

5

Teichoic acid: Induction of metachromasia and circular dichroism in pinacyanol dye

Medini Kanta Pal, Tapash Chandra Ghosh

Journal:

Macromolecular Rapid Communications

Année:

1988

Langue:

english

Fichier:

PDF, 184 KB

english, 1988

6

Structural study of two proteins SigE and ORF1 to predict their roles in the biochemical oxidation of sulfur anions via the global sulfur oxidation operon (sox)

Angshuman Bagchi, Tapash Chandra Ghosh

Journal:

Computational Biology and Chemistry

Année:

2006

Langue:

english

Fichier:

PDF, 339 KB

english, 2006

7

Structural identification of a novel thioredoxin SoxS: Prediction of the function in the process of transport of reductants during sulfur oxidation by the novel global sulfur oxidation reaction cycle

Angshuman Bagchi, Tapash Chandra Ghosh

Journal:

Journal of Molecular Structure: THEOCHEM

Année:

2006

Langue:

english

Fichier:

PDF, 222 KB

english, 2006

8

Understanding the Effect of Secondary Structures and Aggregation on Human Protein Folding Class Evolution

Tina Begum, Tapash Chandra Ghosh

Journal:

Journal of Molecular Evolution

Année:

2010

Langue:

english

Fichier:

PDF, 269 KB

english, 2010

9

Demethylation of (Cytosine-5-C-methyl) DNA and regulation of transcription in the epigenetic pathways of cancer development

Samir Kumar Patra, Aditi Patra, Federica Rizzi, Tapash Chandra Ghosh, Saverio Bettuzzi

Journal:

Cancer and Metastasis Reviews

Année:

2008

Langue:

english

Fichier:

PDF, 500 KB

english, 2008

10

Synonymous codon usage in different protein secondary structural classes of human genes: Implication for increased non-randomness of GC3rich genes towards protein stability

Pamela Mukhopadhyay, Surajit Basak, Tapash Chandra Ghosh

Journal:

Journal of Biosciences

Année:

2007

Langue:

english

Fichier:

PDF, 127 KB

english, 2007

11

Structural insight into the interactions of SoxV, SoxW and SoxS in the process of transport of reductants during sulfur oxidation by the novel global sulfur oxidation reaction cycle

Angshuman Bagchi, Tapash Chandra Ghosh

Journal:

Biophysical Chemistry

Année:

2006

Langue:

english

Fichier:

PDF, 545 KB

english, 2006

12

Insights into the genomic features and evolutionary impact of the genes configuring duplicated pseudogenes in human

Kamalika Sen, Soumita Podder, Tapash Chandra Ghosh

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 217 KB

english, 2010

13

Correlations between genomic GC levels and optimal growth temperatures: some comments

Surajit Basak, Syamsundar Mandal, Tapash Chandra Ghosh

Journal:

Biochemical and Biophysical Research Communications

Année:

2005

Langue:

english

Fichier:

PDF, 91 KB

english, 2005

14

On the origin of genomic adaptation at high temperature for prokaryotic organisms

Surajit Basak, Tapash Chandra Ghosh

Journal:

Biochemical and Biophysical Research Communications

Année:

2005

Langue:

english

Fichier:

PDF, 181 KB

english, 2005

15

A structural study towards the understanding of the interactions of SoxY, SoxZ, and SoxB, leading to the oxidation of sulfur anions via the novel global sulfur oxidizing (sox) operon

Angshuman Bagchi, Tapash Chandra Ghosh

Journal:

Biochemical and Biophysical Research Communications

Année:

2005

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2005

16

Reinvestigating the codon and amino acid usage of S. cerevisiae genome: A new insight from protein secondary structure analysis

Bratati Kahali, Surajit Basak, Tapash Chandra Ghosh

Journal:

Biochemical and Biophysical Research Communications

Année:

2007

Langue:

english

Fichier:

PDF, 187 KB

english, 2007

17

Temperature adaptation of synonymous codon usage in different functional categories of genes: A comparative study between homologous genes of Methanococcus jannaschii and Methanococcus maripaludis

Surajit Basak, Tapash Chandra Ghosh

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 100 KB

english, 2006

18

The compositional transition of vertebrate genomes: an analysis of the secondary structure of the proteins encoded by human genes

Giuseppe D'Onofrio, Tapash Chandra Ghosh

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 239 KB

english, 2005

19

Nature of selective constraints on synonymous codon usage of rice differs in GC-poor and GC-rich genes

Pamela Mukhopadhyay, Surajit Basak, Tapash Chandra Ghosh

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 404 KB

english, 2007

20

Exploring the evolutionary rate differences of party hub and date hub proteins in Saccharomyces cerevisiae protein–protein interaction network

Bratati Kahali, Shandar Ahmad, Tapash Chandra Ghosh

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 241 KB

english, 2009

21

Evolutionary constraints on hub and non-hub proteins in human protein interaction network: Insight from protein connectivity and intrinsic disorder

Baisali Manna, Tanusree Bhattacharya, Bratati Kahali, Tapash Chandra Ghosh

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 350 KB

english, 2009

22

Multifunctionality dominantly determines the rate of human housekeeping and tissue specific interacting protein evolution

Soumita Podder, Pamela Mukhopadhyay, Tapash Chandra Ghosh

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 378 KB

english, 2009

23

On nucleotide solvent accessibility in RNA structure

Yumlembam H. Singh, Munazah Andrabi, Bratati Kahali, Tapash Chandra Ghosh, Kenji Mizuguchi, Alex V. Kochetov, Shandar Ahmad

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 669 KB

english, 2010

24

Selective constraints in yeast genes with differential expressivity: Codon pair usage and mRNA stability perspectives

Bratati Kahali, Shandar Ahmad, Tapash Chandra Ghosh

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 300 KB

english, 2011

25

Evolutionary conservation and disease gene association of the human genes composing pseudogenes

Kamalika Sen, Tapash Chandra Ghosh

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 457 KB

english, 2012

26

Insights into the molecular correlates modulating functional compensation between monogenic and polygenic disease gene duplicates in human

Soumita Podder, Tapash Chandra Ghosh

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 305 KB

english, 2011

27

The base composition of the genes is correlated with the secondary structures of the encoded proteins

Giuseppe D'Onofrio, Tapash Chandra Ghosh, Giorgio Bernardi

Journal:

Année:

2002

Langue:

english

Fichier:

PDF, 272 KB

english, 2002

28

Different functional classes of genes are characterized by different compositional properties

Giuseppe D’Onofrio, Tapash Chandra Ghosh, Salvatore Saccone

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 618 KB

english, 2007

29

On the origin of synonymous codon usage divergence between thermophilic and mesophilic prokaryotes

Surajit Basak, Sujata Roy, Tapash Chandra Ghosh

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 146 KB

english, 2007

30

Evolutionary dynamics of human autoimmune disease genes and malfunctioned immunological genes

Soumita Podder, Tapash Chandra Ghosh

Journal:

BMC Evolutionary Biology

Année:

2012

Langue:

english

Fichier:

PDF, 384 KB

english, 2012

31

Complex-forming proteins escape the robust regulations of miRNA in human

Das, Jyotirmoy, Chakraborty, Sandip, Podder, Soumita, Ghosh, Tapash Chandra

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 474 KB

english, 2013

32

Prevalent structural disorder carries signature of prokaryotic adaptation to oxic atmosphere

Panda, Arup, Ghosh, Tapash Chandra

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 921 KB

english, 2014

33

New Direction to the Solution of Protein Folding Problem

Bagchi, Angshuman, Ghosh, Tapash Chandra

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2011

Langue:

english

Fichier:

PDF, 193 KB

english, 2011

34

Delving Deeper into the Unexpected Correlation Between Gene Expressivity and Codon Usage Bias of Escherichia coli Genome

Kahali, Bratati, Basak, Surajit, Ghosh, Tapash Chandra

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2008

Langue:

english

Fichier:

PDF, 336 KB

english, 2008

35

Structural Interaction Between DsrE-DsrF-DsrH Proteins Involved in the Transport of Electrons in the dsr Operon

Bagchi, Angshuman, Ghosh, Tapash Chandra

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2008

Langue:

english

Fichier:

PDF, 3.15 MB

english, 2008

36

GC-made protein disorder sheds new light on vertebrate evolution

Panda, Arup, Podder, Soumita, Chakraborty, Sandip, Ghosh, Tapash Chandra

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 444 KB

english, 2014

37

Disorderness in Escherichia coli proteome: perception of folding fidelity and protein–protein interactions

Kahali, Bratati, Ghosh, Tapash Chandra

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2013

Langue:

english

Fichier:

PDF, 111 KB

english, 2013

38

Gene Expression Level Shapes the Amino Acid Usages in Prochlorococcus marinus MED4

Banerjee, Tania, Ghosh, Tapash Chandra

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2006

Langue:

english

Fichier:

PDF, 522 KB

english, 2006

39

Relationship between Gene Compactness and Base Composition in Rice and Human Genome

Mukhopadhyay, Pamela, Ghosh, Tapash Chandra

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2010

Langue:

english

Fichier:

PDF, 411 KB

english, 2010

40

Overlapping genes: a new strategy of thermophilic stress tolerance in prokaryotes

Saha, Deeya, Panda, Arup, Podder, Soumita, Ghosh, Tapash Chandra

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 417 KB

english, 2015

41

Elucidating evolutionary features and functional implications of orphan genes in Leishmania major

Mukherjee, Sumit, Panda, Arup, Ghosh, Tapash Chandra

Journal:

Infection, Genetics and Evolution

Année:

2015

Langue:

english

Fichier:

PDF, 367 KB

english, 2015

42

Exploring the evolutionary rate differences between human disease and non-disease genes

Chakraborty, Sandip, Panda, Arup, Ghosh, Tapash Chandra

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 512 KB

english, 2015

43

Evolutionary Rate Heterogeneity of Primary and Secondary Metabolic Pathway Genes in Arabidopsis thaliana

Mukherjee, Dola, Mukherjee, Ashutosh, Ghosh, Tapash Chandra

Journal:

Genome Biology and Evolution

Année:

2016

Langue:

english

Fichier:

PDF, 463 KB

english, 2016

44

Expression pattern similarities support the prediction of orthologs retaining common functions after gene duplication events

Das, Malay, Haberer, Georg, Panda, Arup, Laha, Shayani Das, Ghosh, Tapash Chandra, Schäffner, Anton R.

Journal:

PLANT PHYSIOLOGY

Année:

2016

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2016

45

Deciphering the cross-talking of human competitive endogenous RNAs in K562 chronic myelogenous leukemia cell line

Sen, Kamalika, Sarkar, Arijita, Maji, Ranjan Kumar, Ghosh, Zhumur, Gupta, Sanjib, Ghosh, Tapash Chandra

Journal:

Molecular BioSystems

Année:

2016

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2016

46

Synonymous Codon Usage Analysis of the Mycobacteriophage Bxz1 and Its Plating Bacteria M. smegmatis: Identification of Highly and Lowly Expressed Genes of Bxz1 and the Possible Function of Its tRNA Species

Sahu, Keya, Gupta, Sanjib Kumar, Ghosh, Tapash Chandra, Sau, Subrata

Journal:

Journal of Biochemistry and molecular biology

Année:

2004

Langue:

english

Fichier:

PDF, 484 KB

english, 2004

47

Codon degeneracy and amino acid abundance influence the measures of codon usage bias: improved Nc ( N̂ c ) and ENCprime ( N̂ ′c ) measures

Satapathy, Siddhartha Sankar, Sahoo, Ajit Kumar, Ray, Suvendra Kumar, Ghosh, Tapash Chandra

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 186 KB

english, 2017

48

Insights into human intrinsically disordered proteins from their gene expression profile

Panda, Arup, Acharya, Debarun, Ghosh, Tapash Chandra

Journal:

Molecular BioSystems

Année:

2017

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2017

49

Evolutionary rate heterogeneity between multi- and single-interface hubs across human housekeeping and tissue-specific protein interaction network: Insights from proteins' and its partners' properties

Biswas, Kakali, Acharya, Debarun, Podder, Soumita, Ghosh, Tapash Chandra

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 679 KB

english, 2017

50

The role of introns in the conservation of the metabolic genes of Arabidopsis thaliana

Mukherjee, Dola, Saha, Deeya, Acharya, Debarun, Mukherjee, Ashutosh, Chakraborty, Sandip, Ghosh, Tapash Chandra

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 768 KB

english, 2017